ncRNA database site
Database > xmldownloads  


>>
Database

>>
BLAST Search

>>
Fasta Downloads

>>
XML Downloads

>>
UCSC BED Files

>>
Portal

>>
Site news

>>
About

>>
Help





File Name: XMLEvofoldV2.zip
File Size: 1,079,859 bytes
Downloaded: 728 times
Posted by stuartjs on Thursday, September 28, 2006 (EAST)
Click here to download this file
This zipped XML + DTD file contains the Evofold Version 2 dataset
EvoFold (Torarinsson et al., 2006) utilizes a comparative genomics method based on phylogenetic stochastic context-free grammars to identify functional RNAs. Using an eight-way genome wide alignment of human, chimpanzee, mouse, rat, dog, chicken, zebra-fish and puffer-fish, over 48,000 candidate RNA structures were identified in the human genome.

Add Your Comment


 
Database   |  BLAST Search   |  Fasta Downloads   |  XML Downloads   |  UCSC BED Files   |  Portal   |  Site news   |  About   |  Help